Browse of TCMCG006C37884 protein

CDS

Accession Number	TCMCG006C37884
gbkey	CDS
Protein Id	XP_013747410.1
Location	join(33998714..33998873,33998975..33999183,33999356..33999493,33999604..33999777,34000131..34000227,34000487..34000599,34000680..34000802,34000919..34000990,34001555..34001647,34001974..34002084,34002166..34002288,34002536..34002721,34002800..34002874,34003311..34003447,34003609..34003743,34003847..34003992,34004075..34004140,34004373..34004479,34004563..34004643,34004732..34004806,34004891..34004992,34005176..34005344,34005426..34005571,34005710..34005793,34005863..34005963,34006142..34006292,34006502..34006576,34006677..34006824,34007196..34007841,34008000..34008054,34008137..34008282,34008354..34008537,34008667..34008765,34009365..34009732,34009827..34010003,34010211..34010307,34010397..34010552,34010643..34010873,34010961..34011044,34011131..34011238)
Gene	LOC106450308
GeneID	106450308
Organism	Brassica napus

Protein

Length	1915aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013891956.2
Definition	rRNA biogenesis protein RRP5-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGGCTCCATCGAAAAGAGTTCCAAGCGGAAAACGCAACGATTCAACAAAGGCATTCAAATCATCGAAGAAATCGTTCAAAAAGACGAAGGACGATGTCGCTGCAAGGTCTGAAGCCATGGCTCTGCAGCTCGAAGAGGTTCCCGACTTCCCTCGAGGTGGAGGCTCTTCTCTGAGCAAGAAAGAGCGTGAGAAGATTCACGAAGAAGTCGACGCTGAGTTTGACGCTGATGAGCGTGTTGCTAAGAGGAGTAAAGGAGGGAAACCTAAGAAGAGAAACACTAGCGATGTAGACGAATTGGGATCTCTTTTTGACGGTGGTTTAACTGGGAAACGGCCGAGATATGCTAATAAGATTACCATTAAGAATATTTCCGCCGGAATGAAGCTTTTGGGGGTTGTTACTGAGGTCAACCAGAAAGATATTGTAGTGAGTCTTCCAGGGGGCTTACGTGGTTTAGTTCGCGCAAGCGAGGCATTGGATTTTACAGATTTCGGAACTGAGGACGATGAAAATGAACTCCTTCGAGACATCTTTTCTGTGGGTCAGCTTGTTCCCTGCATTGTGTTGCAGTTAGATGATGATAAGAAGGAGGCGGGGAAAAGAAAGATATGGCTTTCATTGCGACTTTCTTTATTGCACAAGGGATTCAGTTTGGATTCCTTTCAACCTGGGATGGTAGTTACTGCAAATGTGAAAAGCGTGGAAGATCATGGTTATATCCTTCAATTTGGAATGCCTTCTATCACAGGATTTATCAAGAAAAGCCATGAAGGAACTCGGGAGTTAAAGACTGGACAACTTATTCAGGGCGTGGTTACAAATATTGATAAAGAACGTAAAATTGTTAGTCTTAGTTCTGACCCAGATTCAGTGGCAAAGTGTGTGACTAAGGATTTGAGTGGGATGTCGTTCGATCTTCTCATCCCAGGCATGATGGTTAATGCCCGTGTTCAGTCTGCCCTTGAGAATGGATTACTATTAGGATTTCTTATGTACTTTACTGGAACGGTTGATCTATTCCATCTACAAAATCCATTATGTAACAAGAGCTGGAAGGATGAATATAATCCGACTAAGATGGTTAATGCTAGAATATTGTTTATCGATCCATCAACTAGAGCTGTTGGTTTGACGTTAAACCCACATCTTGTTGGCAACAAGGCTCCTCCTCTGCATGTCTCCAGCGGAGACATATTCGACGAAGCAAAAGTTGTCCGTGTTGATAAATCAGGCCTTCTTCTTGAGCTCCCTTCTAAGCCTGTTTCAACGCCAGCATATGTTAGCACATATGACGCTGCTGAAGATGAAGTTAAGAAACTTGAAAAGAAGTTTAAGGAAGGAAGCCGCATCCGTGTTCGAGTCCTCGGCCTTAAGCAGATAGAGGGGTTGGCCATAGGGACTTTAAAGGAAAGCGCCTTTGAAGGTCCAGCGTTCACCCACTCAGATGTCAAGCCTGGCATGGTGACGAAGGCTAAAGTCATATCTGTTGATACATTTGGTGCCATTGTGCAATTTCCGGGTGGTCTGAAAGCAATGTGCCCACTTCAGCATATGTCTGAGTTTGAAGTTAGGAAGCCCAGGAAGAAGTTCAAGGTTGGAGCTGAATTAATATTTCGTGTGCTGGGCTGCAAATCAAAGAGAATAACTGTTACCTGCAAGAAAACACTTGTTAAGTCTAAACTTCCGATTTTGAGTTCTTACGCTGATGCAACTGAAGGACTAGTGACGCATGGCTGGATAACAAAGATTGAAAAGAATGGATGCTTTGTTCGCTTCTATAATGGAGTGCAAGGATTTGTTGCCAGATTTGAACTTGGTTTAGAGCCTGGAAGTGATCCCGCTTCAGTGTTTCATATTGGGGAGGTTGTCAAATGTAGAGTTACCAGTGCGGTTCATGGTACTCGAAGGATCAACCTCAGTTTTATGATGAAGCCAACAAGCGTTTCTGAAGACGATTCAATCAAGTTAGGTAGTATTGTATCTGGGGTAATTGATAGTATAACTCCTCAGGCAGTCACTGTCCATGTTAAATCCAAAGGTCTTCTGAAGGGTACAATTTTTGCAGAACATTTAGCTGATCATCATGACCAAGCAAATTTAATGATATCACTTTTAAGACCTGGATTTGAGCTTGATAAGCTGCTGGTAATAGACATTGAAGGCAATAACTTGGCTCTCTCCTCAAAATATTCTCTCATCAAGTTTGCTGAAGAGCTCCCTTCGGATTTAAGTCAGCTCCAGCCAAACTCAGTGGTTCATGGTTATGTTTGTAACCTGATTGAGAATGGCTGTTTCGTCCGTTTCCTGGGTCGGTTGACTGGTTTCGCCCCGAGAAGCAAGGCAATTGACGAACCCAGGGCAGATCTCTCAGAGTCCTTCTTTGTTGGACAATCGGTTCGGGCTAATATAGTTGATGTCAATCAAGAAAAGAGCAGGGTGACTCTTTCATTGAAACAGTCATCTTGTGCTTCTGTAGATGCTTCTTTTGTTGAAGAGTATTTCCTTACAGATGAGAAGATCTCGAACCTGCAATCATCTGGTGTTACTGAAAGCGAGTGTAGCTGGGTTGAGAAATTCTCTATTGGGAGTTTGATCAAGGGAACCGTACAGGATAAAAATGACCTTGGTTTGGTGGTGAATTTTGACAATATTAATAATGTCCTTGGTTTTATACCTAAGTATCATTTGGGTGGAACTAGTTTGGAAAACGGCTCTGTTGTCCAAGCAGTTGTTCTTGATATTTCTAGGGCAGAGAGACTAGTTGATTTGTCTTTGAGGCCTGAGCTCATAAACAGCTCAGCCAAAGAGGTGTCCAACAGTCAGTCAAAAAAGAAACGTAAAAGAGGTATTTCCAAGGAACTTGAAATCCACCAGAGGGTCAGCGCTGTTGTAGAGATTGTGAAGGAGCAATACTTGATTTTGTCGATTCCAGAACATAATTACTCTATTGGATATGCGGCAGTATCAGACTATAACACACAGAAGTTACCAGTGAAACAGTTTTCCACTGGACAAAGTGTTGTTGCGTCTGTTGAGGCTCTGCAAAACCCTTTGACGTCCGGGAGGTTGCTTTTACTTCTTGACTCTGTTTCCGGTAGTTCTGAGACATCGTCTAAGAGGGCAAAGAAGAAAACCAATTGTGAAGTTGGTTCTGTTGTCCAAGCCGAGATTACTGAAATTAAGCCTTTTGAAGTAAGAGTAAACTTTGGCCAAAGTTTCCGAGGAAGAATCCACATAACGGAGGTGAATGATGTTGGTACAAATGAAGAACCTTTTGCCAAATTCAGAGTTGGTCAATCAGTGTCTGCAAGGGTTGTTGCAAAGCCCTGTCATACGGATAATAAAAAGAGTAAACTCTGGGAGCTTTCTGTAAAGCCTGCAATACTTAGAGACTCTGGTGAGCTGACTGAAGTGAGGGAACAACTTGAGTTTGTTTCTGGAGAGCGTGTCTGCGGATATGTCTACAAAGTGGATAAAGAATGGGTTTGGTTGGCAATATCTCGCAATGTGACGGCACGCATATTCATTTTAGACACTGCATGCGAAGCTCGTGAACTTGAGGAGTTCGAGGGGCGTTTTCCCATTGGTAAAGCTGTTTCAGGCTATGTTTTGACGTACAATAAAGAGAAGAAAACTGTACGGTTGGTTCAGCGCCCACTACTGAATATCCAGAAAAGCATTGGCAATGATGGAGGGCCTAAAAAGGATAAACTAGACAGTAGCATTCCCGGTGATGATGCTACTCTATTCATTCATGAAGGAGACATTTTGGGTGGAAGAATTTCTAAGATACTTCCTGGTGTTGGTGGACCTCGTGTGCAAATAGGTCCTTATGTGTTTGGGAGAGTTCACTTTACTGAAATCAACGATTCATGGGTCTCCAATCCATTAGATGGTCTTCATGAAGGCCAATTTGTCAAATGCAAGGTCTTAGAAATCAGCAATTCTAGTAAAGGGACTTTGCAAATTGAACTGTCATTACGGACATCACTAGATGGCATGAGTTCGGACCATCTCTCAGAAGCTTCCAGTAATAATGTTTGCAAGCGTTTTGAAAGGATTGAAGATCTTACTCCTGATATGGGAATCGAGGGTTATGTCAAGAATACGATGTCAAAAGGTTGTTTTATCATGCTTTCAAGAACACTCGACGCAAAAGTTCTACTGTCAAATCTATCTGACACTTTTGTCAAGGATCCCGAAAATGAATTTCCAGTAGGAAAACTTGTCACTGGCAGGGTGTTAAATGTGGAGCCGTTATCAAAGCGGGTAGAAGTCACTTTGAAGAAAGGAAATGCTGGTGGGCCACCAAAATCTGAATCTTATGACCTGAAGCAATTCCATGTTGGAGACATAATTTCTGGGAGAATCAAACGTGTGGAGGCTTATGGCTTGTTCATTGAAATAGACCAAACGGGCATGGTTGGATTATGTCATAAATCACAACTTTCTGATGATCATATCGAGGATATACATGCCAGATATGAAGCTGGGGAAAGCGTCACCGCAAAGATTTTAAAGCTGGACGAGGAAAAGCGACGTATATCCCTTGGGATGAAGAGTTCCTATTTTGTGAACGGCGATGATGAGAAGGCAGAGCCATTTTCTGAAGAAAAAGCTAATGAAGCCAACATGGAATGTGATCCAATCAATGAGTCGGAGTCGGGAGTTCTTACAGCAGTTGGTGATTTTGGGTTCCAGGAAACAAACAGTGGAACTTCTCTGGCTATTGCCCAAGTTGAGTCAAGGGCTTCTATCCTTCCGCTTGAGGTTGACCTTGACGACATTGAGGAGGCGGACCTTGACAAGAATCAAAATCAGAAACTACAGGGAGCCGATAAAGATGAAAAGAGCAAGAGAAGGGAAAGGCAAAAAGACAAGGAGGAAAGAGAGAAAAAGATACAAGCTGCTGAAGGAAGATTGCTGGAGAATCACGCTCCCGAGAGTGCTGATGAGTTTGAGAAAATGGTTAGAAGCTCTCCAAATAGCAGCTTTGTCTGGATTAAGTATATGGCGTTCATGCTCAGCTTGGCTGATATTGAGAAAGCCAGGTCCATTGCTGAGAGGGCCTTGAGGACTATAAATATTCGTGAAGAAGAAGAAAAGCTAAACATATGGGTTGCTTACTTCAATTTGGAAAATGAACATGGAAGTCCTCCAGAGGAAGCTGTTAAGAAAGTTTTTGAAAGAGCGCGTCAATACTGTGACCCGAAGAAAGTTTACAATGCCCTCTTGGGCGTGTACGAGAGAACAGAGCAATATAAATTGGCTGATAAGCTGCTTGATGAGATGATCAAGAAGTTCAAGCAATCCTGCAAGGTTTGGTTACGGAAGATACAAAGTTATCTAAAGCTGGACGAGGAAAACATTCAGTCCGTCGTGAATCGTGCCTTGCTATGTCTTCCGCGCCATAAGCACATTAAATTTATATCACAGACAGCTATTCTTGAGTTCAAATGCGGAGTTGCAGACAGAGGGAGATCACTTTTTGAACGCGTTCTTAGGGAGTACCCGAAAAGAACAGACTTGTGGAGTGTTTATCTTGACCAGGAGATCCGGTTGGGAGAAGTTGATGTGATTAGATCTTTGTTCGAGAGAGCCATTAGCTTGAGCTTGCCTCCTAAGAAGATGAAGTTTTTATTCAAGAAGTTTTTGGAATATGAGAAATCTGCTGGTGACGAGGAGAGAGTGGAGTACGTGAAGCAAAGGGCAATGGAGTATGCTGACAGCACCTTGGCCTGA

Protein:   MVAPSKRVPSGKRNDSTKAFKSSKKSFKKTKDDVAARSEAMALQLEEVPDFPRGGGSSLSKKEREKIHEEVDAEFDADERVAKRSKGGKPKKRNTSDVDELGSLFDGGLTGKRPRYANKITIKNISAGMKLLGVVTEVNQKDIVVSLPGGLRGLVRASEALDFTDFGTEDDENELLRDIFSVGQLVPCIVLQLDDDKKEAGKRKIWLSLRLSLLHKGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDLLIPGMMVNARVQSALENGLLLGFLMYFTGTVDLFHLQNPLCNKSWKDEYNPTKMVNARILFIDPSTRAVGLTLNPHLVGNKAPPLHVSSGDIFDEAKVVRVDKSGLLLELPSKPVSTPAYVSTYDAAEDEVKKLEKKFKEGSRIRVRVLGLKQIEGLAIGTLKESAFEGPAFTHSDVKPGMVTKAKVISVDTFGAIVQFPGGLKAMCPLQHMSEFEVRKPRKKFKVGAELIFRVLGCKSKRITVTCKKTLVKSKLPILSSYADATEGLVTHGWITKIEKNGCFVRFYNGVQGFVARFELGLEPGSDPASVFHIGEVVKCRVTSAVHGTRRINLSFMMKPTSVSEDDSIKLGSIVSGVIDSITPQAVTVHVKSKGLLKGTIFAEHLADHHDQANLMISLLRPGFELDKLLVIDIEGNNLALSSKYSLIKFAEELPSDLSQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDEPRADLSESFFVGQSVRANIVDVNQEKSRVTLSLKQSSCASVDASFVEEYFLTDEKISNLQSSGVTESECSWVEKFSIGSLIKGTVQDKNDLGLVVNFDNINNVLGFIPKYHLGGTSLENGSVVQAVVLDISRAERLVDLSLRPELINSSAKEVSNSQSKKKRKRGISKELEIHQRVSAVVEIVKEQYLILSIPEHNYSIGYAAVSDYNTQKLPVKQFSTGQSVVASVEALQNPLTSGRLLLLLDSVSGSSETSSKRAKKKTNCEVGSVVQAEITEIKPFEVRVNFGQSFRGRIHITEVNDVGTNEEPFAKFRVGQSVSARVVAKPCHTDNKKSKLWELSVKPAILRDSGELTEVREQLEFVSGERVCGYVYKVDKEWVWLAISRNVTARIFILDTACEARELEEFEGRFPIGKAVSGYVLTYNKEKKTVRLVQRPLLNIQKSIGNDGGPKKDKLDSSIPGDDATLFIHEGDILGGRISKILPGVGGPRVQIGPYVFGRVHFTEINDSWVSNPLDGLHEGQFVKCKVLEISNSSKGTLQIELSLRTSLDGMSSDHLSEASSNNVCKRFERIEDLTPDMGIEGYVKNTMSKGCFIMLSRTLDAKVLLSNLSDTFVKDPENEFPVGKLVTGRVLNVEPLSKRVEVTLKKGNAGGPPKSESYDLKQFHVGDIISGRIKRVEAYGLFIEIDQTGMVGLCHKSQLSDDHIEDIHARYEAGESVTAKILKLDEEKRRISLGMKSSYFVNGDDEKAEPFSEEKANEANMECDPINESESGVLTAVGDFGFQETNSGTSLAIAQVESRASILPLEVDLDDIEEADLDKNQNQKLQGADKDEKSKRRERQKDKEEREKKIQAAEGRLLENHAPESADEFEKMVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYNALLGVYERTEQYKLADKLLDEMIKKFKQSCKVWLRKIQSYLKLDEENIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFERVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSAGDEERVEYVKQRAMEYADSTLA